Search results for " purification"

showing 10 items of 244 documents

Commissioning of the vacuum system of the KATRIN Main Spectrometer

2016

The KATRIN experiment will probe the neutrino mass by measuring the β-electron energy spectrum near the endpoint of tritium β-decay. An integral energy analysis will be performed by an electro-static spectrometer (``Main Spectrometer''), an ultra-high vacuum vessel with a length of 23.2 m, a volume of 1240 m[superscript 3], and a complex inner electrode system with about 120 000 individual parts. The strong magnetic field that guides the β-electrons is provided by super-conducting solenoids at both ends of the spectrometer. Its influence on turbo-molecular pumps and vacuum gauges had to be considered. A system consisting of 6 turbo-molecular pumps and 3 km of non-evaporable getter strips ha…

010302 applied physicsPhysicsLight nucleusPhysics - Instrumentation and DetectorsSpectrometerSpectrometersPhysics::Instrumentation and DetectorsVacuum-basedFOS: Physical sciencesInstrumentation and Detectors (physics.ins-det)01 natural sciencesEnergy analysisNuclear physics0103 physical sciencesEnergy spectrumGas systems and purificationNeutrino detectorsddc:620010306 general physicsInstrumentationMathematical PhysicsEngineering & allied operationsKATRINdetectors
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Recombinant laccase from Pediococcus acidilactici CECT 5930 with ability to degrade tyramine

2017

Biogenic amines degradation by bacterial laccases is little known, so we have cloned and heterologously expressed, in E. coli, a new laccase from Pediococcus acidilactici CECT 5930 (Lpa5930), a lactic acid bacterium commonly found in foods able to degrade tyramine. The recombinant enzyme has been characterized by physical and biochemical assays. Here we report the optimization of expression and purification procedures of this laccase. DNA encoding sequence of laccase from P. acidilactici was amplified by PCR and cloned into the expression plasmid pET28a for induction by isopropyl-β-D-thiogalactoipyranoside. Protein expression was performed in E. coli BL21(DE3) harboring pGro7 plasmid expres…

0106 biological sciences0301 basic medicineArabinoseMolecular biologylcsh:MedicineLaccasesBiochemistryBiotecnologia01 natural sciencesSubstrate Specificitylaw.inventionDatabase and Informatics Methodschemistry.chemical_compoundlawRecombinant Protein PurificationCloning MolecularAmineslcsh:Sciencechemistry.chemical_classificationMultidisciplinaryABTSbiologyOrganic CompoundsTemperatureHydrogen-Ion ConcentrationTyramineRecombinant ProteinsEnzymesChemistryRecombination-Based AssayBiochemistryPhysical SciencesRecombinant DNAElectrophoresis Polyacrylamide GelOxidation-ReductionSequence AnalysisResearch ArticleProtein PurificationBioinformaticsTyramineLibrary ScreeningDNA constructionResearch and Analysis Methods03 medical and health sciencesBacterial ProteinsSequence Motif Analysis010608 biotechnologyAmino Acid SequenceBenzothiazolesPediococcus acidilacticiLaccaseMolecular Biology Assays and Analysis TechniquesBase SequenceMolecular massLaccaseOrganic Chemistrylcsh:RChemical CompoundsBiology and Life SciencesProteinsPediococcus acidilacticiSequence Analysis DNAbiology.organism_classificationMolecular biology techniques030104 developmental biologyEnzymechemistryPlasmid ConstructionEnzymologySpectrophotometry Ultravioletlcsh:QSulfonic AcidsEnzimsProteïnesPurification TechniquesPLOS ONE
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Biotrickling filter modeling for styrene abatement. Part 1: Model development, calibration and validation on an industrial scale

2017

Abstract A three-phase dynamic mathematical model based on mass balances describing the main processes in biotrickling filtration: convection, mass transfer, diffusion, and biodegradation was calibrated and validated for the simulation of an industrial styrene-degrading biotrickling filter. The model considered the key features of the industrial operation of biotrickling filters: variable conditions of loading and intermittent irrigation. These features were included in the model switching from the mathematical description of periods with and without irrigation. Model equations were based on the mass balances describing the main processes in biotrickling filtration: convection, mass transfe…

0106 biological sciencesConvectionEngineeringEnvironmental EngineeringHealth Toxicology and MutagenesiseducationBiotrickling filter010501 environmental sciencesResidence time (fluid dynamics)01 natural scienceslaw.invention:Enginyeria química::Química del medi ambient::Química atmosfèrica [Àrees temàtiques de la UPC]Filter (large eddy simulation)Bioreactorslaw010608 biotechnologyMass transferEnvironmental ChemistryGases - PurificationVolatile organic compoundDiffusion (business)FiltrationStyrene0105 earth and related environmental scienceschemistry.chemical_classificationgeographyAir PollutantsVolatile Organic Compoundsgeography.geographical_feature_categorybusiness.industryPublic Health Environmental and Occupational HealthEnvironmental engineeringGeneral MedicineGeneral ChemistryPilot unitModels TheoreticalVolatile organic compoundInletPollutionGasos - DepuracióBiodegradation EnvironmentalchemistryCalibrationMathematical modelingBiological air treatmentbusinessFiltration
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Performance of a membrane-coupled high-rate algal pond for urban wastewater treatment at demonstration scale

2020

[EN] The objective of this study was to evaluate the performance of an outdoor membrane-coupled high-rate algal pond equipped with industrial-scale membranes for treating urban wastewater. Decoupling biomass retention time (BRT) and hydraulic retention time (HRT) by membrane filtration resulted in improved process efficiencies, with higher biomass productivities and nutrient removal rates when operating at low HRTs. At 6 days of BRT, biomass productivity increased from 30 to 66 and to 95 g.m(-3).d(-1) when operating at HRTs of 6, 4 and 2.5 days, respectively. The corresponding nitrogen removal rates were 4, 8 and 11 g N.m(-3).d(-1) and the phosphorous removal rates were 0.5, 1.3 and 1.6 g P…

0106 biological sciencesINGENIERIA HIDRAULICAEnvironmental EngineeringHydraulic retention timeNitrogenUltrafiltrationBioengineering010501 environmental sciencesWastewater7. Clean energy01 natural sciencesEnergy requirementWaste Disposal FluidWater PurificationNutrient010608 biotechnologyHollow-fibre membranes[SPI.GPROC]Engineering Sciences [physics]/Chemical and Process EngineeringBiomassPondsWaste Management and DisposalTECNOLOGIA DEL MEDIO AMBIENTE0105 earth and related environmental sciencesHigh rateRenewable Energy Sustainability and the EnvironmentGeneral MedicinePulp and paper industryProduced water6. Clean waterIndustrial-scaleHRAPMembraneNutrient recoveryWastewater13. Climate actionEnvironmental scienceSewage treatment
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A technical trick for studying proteomics in parallel to transcriptomics in symbiotic root-fungus interactions

2004

We have developed a protocol in which proteins and mRNA can be analyzed from single root samples. This experimental design was validated in arbuscular mycorrhiza by comparing the proteins profiles obtained with those from a classical protein extraction process. It is a step forward to make simultaneous proteome and transcriptiome profiling possible.

0106 biological sciencesProteomeComputational biologyFungusProteomicsPlant Roots01 natural sciencesBiochemistryFungal ProteinsTranscriptome03 medical and health sciencesGene Expression Regulation PlantMycorrhizaeBotanyProtein purificationMedicago[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologyElectrophoresis Gel Two-Dimensional[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyRNA MessengerSymbiosisMolecular BiologyComputingMilieux_MISCELLANEOUS030304 developmental biology0303 health sciencesbiologyGene Expression Profilingfungibiology.organism_classificationGENOMIQUEMedicago truncatulaArbuscular mycorrhizaProteomeFunctional genomics010606 plant biology & botanyPROTEOMICS
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The cytoprotective protein MANF promotes neuronal survival independently from its role as a GRP78 cofactor

2021

Mesencephalic astrocyte-derived neurotrophic factor (MANF) is an endoplasmic reticulum (ER)-stress-regulated protein exhibiting cytoprotective properties through a poorly understood mechanism in various in vitro and in vivo models of neuronal and non-neuronal damage. Although initially characterized as a secreted neurotrophic factor for midbrain dopamine neurons, MANF has recently gained more interest for its intracellular role in regulating the ER homeostasis, including serving as a cofactor of the chaperone glucose-regulated protein 78 (GRP78). We aimed for a better understanding of the neuroprotective mechanisms of MANF. Here we show for the first time that MANF promotes the survival of …

0301 basic medicineBiFC bimolecular fluorescence complementationMST microscale thermophoresisPDIA1 protein disulfide isomerase family A member 1ApoptosisNEUROTROPHIC FACTOR MANFEndoplasmic ReticulumBiochemistryprotein-protein interactionMiceBimolecular fluorescence complementationUPR unfolded protein responseENDOPLASMIC-RETICULUM STRESSMesencephalonNeurotrophic factorsInsulin-Secreting CellsProtein Interaction MappingBINDINGCOMPREHENSIVE RESOURCEATF6unfolded protein response (UPR)PDIA6 protein disulfide isomerase family A member 6PPIs protein-protein interactionsEndoplasmic Reticulum Chaperone BiPHeat-Shock ProteinsNPTN neuroplastinbiologyChemistryapoptosisunfolded protein responsedopamine neurons3. Good healthCell biologyGDNF glial cell line–derived neurotrophic factorIRE1-ALPHASBD substrate-binding domainendoplasmic reticulum stressMANF mesencephalic astrocyte-derived neurotrophic factorTm tunicamycinneuroprotectionResearch ArticleProtein BindingSignal TransductionGRP78Protein Disulfide-Isomerase FamilyCell SurvivalTH tyrosine hydroxylasePrimary Cell CultureSCG superior cervical ganglionProtein Disulfide-IsomerasesIRE1 inositol-requiring enzyme 1ER-STRESSER endoplasmic reticulum03 medical and health sciencesohjelmoitunut solukuolemaC-MANF C-terminal domain of MANFCSPs chemical shift perturbationsAnimalsHumansHSP70 Heat-Shock ProteinsNerve Growth FactorsNBD nucleotide-binding domainNMR nuclear magnetic resonanceMolecular Biology030102 biochemistry & molecular biologyBIPATF6Dopaminergic NeuronsGene Expression ProfilingBinding proteinneuronal cell deathDISSOCIATIONCell BiologyNEI nucleotide exchange inhibitorEmbryo MammalianadenosiinitrifosfaattiATPhermosolutmesencephalic astrocyte-derived neurotrophic factorprotein–protein interactionPERK protein kinase RNA-like ER kinaseHEK293 Cells030104 developmental biologyGene Expression RegulationChaperone (protein)Tg thapsigarginbiology.proteinUnfolded protein responseAP-MS affinity purification mass spectrometry1182 Biochemistry cell and molecular biologyGFP-SH SH-tagged GFPendoplasmic reticulum stress (ER stress)DA dopaminemesencephalic astrocyte-derived neurotrophic factor (MANF)proteiinitNeuroplastin
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Modulation of the nutritional value of lupine wholemeal and protein isolates using submerged and solid-state fermentation with Pediococcus pentosaceu…

2018

The influence of different factors (submerged and/or solid‐state fermentation, pediococci strain, lupine variety and protein isolation process) on the protein digestibility, total phenolic compounds (TPC) content and radical scavenging activity of Lupinus luteus and angustifolius wholemeal and protein isolates was evaluated. As safety factor, biogenic amines (Bas) formation was analysed. The Pediococcus pentosaceus strains No. 8, No. 9 and No. 10 are suitable starters for lupine wholemeal fermentation and both applied processes (fermentation and protein isolation) increase protein digestibility (by 10%). Higher TPC content in fermented wholemeal can be obtained, compare to isolates. In SMF …

0301 basic medicineCadaverine030109 nutrition & dieteticsbiologyStrain (chemistry)food and beverages04 agricultural and veterinary sciencesbiology.organism_classification040401 food scienceIndustrial and Manufacturing Engineeringfood.foodLupinus luteus03 medical and health scienceschemistry.chemical_compound0404 agricultural biotechnologyfoodchemistrySolid-state fermentationProtein purificationPutrescinePediococcusFermentationFood scienceFood ScienceInternational Journal of Food Science & Technology
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Comparative study of eco- and cytotoxicity during biotransformation of anthraquinone dye Alizarin Blue Black B in optimized cultures of microscopic f…

2017

The aim of this study was to select optimal conditions (C and N sources, initial pH and temperature) for biodecolorization of 0.03% anthraquinone dye Alizarin Blue Black B (ABBB) by microscopic fungi: Haematonectria haematococca BwIII43, K37 and Trichoderma harzianum BsIII33. The phenolic compounds, phytotoxicity (Lepidium sativum L.), biotoxicity (Microtox), cytotoxicity and yeast viability assay were performed to determine the extent of ABBB detoxification. Biodecolorization and detoxification of 0.03% ABBB in H. haematococca BwIII43 and T. harzianum BsIII33 cultures was correlated with extracellular oxidoreductases activity. In turn, secondary products, toxic to human fibroblasts and res…

0301 basic medicineCell SurvivalHealth Toxicology and MutagenesisAnthraquinones010501 environmental sciencesAlizarin01 natural sciencesLepidium sativumCell LineWater Purification03 medical and health scienceschemistry.chemical_compoundBiotransformationYeastsToxicity TestsHumansBiodecolorizationViability assayColoring AgentsCytotoxicityBiotransformationYeast model0105 earth and related environmental sciencesbiologyProoxidative toxicityPublic Health Environmental and Occupational HealthTrichoderma harzianumGeneral Medicinebiology.organism_classificationPollutionYeastHaematonectria haematococcaBiodegradation Environmental030104 developmental biologyBiochemistrychemistryPhytotoxicityDetoxificationOxidoreductasesOxidation-ReductionWater Pollutants ChemicalEcotoxicology and Environmental Safety
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Comparison of hemolytic activity of the intermediate subunit of Entamoeba histolytica and Entamoeba dispar lectins.

2017

Galactose and N-acetyl-D-galactosamine-inhibitable lectin of Entamoeba histolytica has roles in pathogenicity and induction of protective immunity in rodent models of amoebiasis. Recently, the intermediate subunit of the lectin, Igl1, of E. histolytica has been shown to have hemolytic activity. However, the corresponding lectin is also expressed in a non-virulent species, Entamoeba dispar, and another subunit, Igl2, is expressed in the protozoa. Therefore, in this study, we compared the activities of Igl1 and Igl2 subunits from E. histolytica and E. dispar using various regions of recombinant Igl proteins expressed in Escherichia coli. The recombinant E. dispar Igl proteins had comparable h…

0301 basic medicineErythrocytesTime Factorslcsh:MedicineProtein Sequencingmedicine.disease_causePathology and Laboratory MedicineBiochemistrylaw.inventionEntamoebafluids and secretionslawLectinsMedicine and Health SciencesRecombinant Protein Purificationlcsh:ScienceProtozoansMultidisciplinarybiologyPseudomonas AeruginosaRecombinant ProteinsBacterial PathogensMedical MicrobiologyRecombinant DNAPathogensResearch ArticleProtein PurificationProtein subunitDisparResearch and Analysis MethodsReal-Time Polymerase Chain ReactionMicrobiologyHemolysisMicrobiologyEntamoeba Histolytica03 medical and health sciencesEntamoeba histolyticaPseudomonasParasite Groupsparasitic diseasesmedicineAnimalsTrophozoitesHemoglobinGene SilencingHorsesMolecular Biology TechniquesSequencing TechniquesEscherichia coliMolecular BiologyMicrobial PathogensBacterialcsh:REntamoebaOrganismsLectinBiology and Life SciencesProteinsbiology.organism_classificationParasitic Protozoansdigestive system diseasesProtein Subunits030104 developmental biologybiology.proteinProtozoaParasitologylcsh:QApicomplexaPurification TechniquesPLoS ONE
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2016

Protein export is central for the survival and virulence of intracellular P. falciparum blood stage parasites. To reach the host cell, exported proteins cross the parasite plasma membrane (PPM) and the parasite-enclosing parasitophorous vacuole membrane (PVM), a process that requires unfolding, suggestive of protein translocation. Components of a proposed translocon at the PVM termed PTEX are essential in this phase of export but translocation activity has not been shown for the complex and questions have been raised about its proposed membrane pore component EXP2 for which no functional data is available in P. falciparum. It is also unclear how PTEX mediates trafficking of both, soluble as…

0301 basic medicineImmunoprecipitation030106 microbiologyImmunologyChromosomal translocationBiologyTransloconMicrobiologyTransmembrane proteinTransport proteinCell biology03 medical and health sciences030104 developmental biologyMembrane proteinVirologyparasitic diseasesProtein purificationGeneticsParasitologyProtein foldingMolecular BiologyPLOS Pathogens
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